Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Gm17971-201ENSMUST00000190239 806 ntBASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdlim7Q3TJD7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Mir2861-201ENSMUST00000175539 82 ntBASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdlim7Q3TJD7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Gm17661-201ENSMUST00000170317 270 ntBASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Gm38027-201ENSMUST00000192315 235 ntBASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdlim7Q3TJD7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdlim7Q3TJD7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pdlim7Q3TJD7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pdlim7Q3TJD7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdlim7Q3TJD7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdlim7Q3TJD7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdlim7Q3TJD7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pdlim7Q3TJD7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms