Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.73■□□□□ 0.43
Q3KNL4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Q3KNL4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Q3KNL4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.73■□□□□ 0.43
Q3KNL4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3KNL4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Q3KNL4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.73■□□□□ 0.43
Q3KNL4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3KNL4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Q3KNL4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3KNL4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Q3KNL4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Q3KNL4 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.72■□□□□ 0.43
Q3KNL4 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.72■□□□□ 0.43
Q3KNL4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.72■□□□□ 0.43
Q3KNL4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.72■□□□□ 0.43
Q3KNL4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3KNL4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Q3KNL4 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.72■□□□□ 0.43
Q3KNL4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Q3KNL4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Q3KNL4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3KNL4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q3KNL4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q3KNL4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q3KNL4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q3KNL4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.7■□□□□ 0.42
Q3KNL4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.7■□□□□ 0.42
Q3KNL4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Q3KNL4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.7■□□□□ 0.42
Q3KNL4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3KNL4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Q3KNL4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.69■□□□□ 0.42
Q3KNL4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.69■□□□□ 0.42
Q3KNL4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q3KNL4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Q3KNL4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.68■□□□□ 0.42
Q3KNL4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.68■□□□□ 0.42
Q3KNL4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Q3KNL4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q3KNL4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Q3KNL4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.67■□□□□ 0.42
Q3KNL4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.67■□□□□ 0.42
Q3KNL4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.67■□□□□ 0.42
Q3KNL4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Q3KNL4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Q3KNL4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q3KNL4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms