Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hspg2Q05793 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hspg2Q05793 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.35□□□□□ -0.27
Hspg2Q05793 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.35□□□□□ -0.27
Hspg2Q05793 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.35□□□□□ -0.27
Hspg2Q05793 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hspg2Q05793 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Gm17807-201ENSMUST00000186869 298 ntBASIC13.34□□□□□ -0.27
Hspg2Q05793 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Gm38285-201ENSMUST00000192928 922 ntBASIC13.34□□□□□ -0.27
Hspg2Q05793 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Gm43514-201ENSMUST00000198852 424 ntBASIC13.34□□□□□ -0.27
Hspg2Q05793 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hspg2Q05793 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hspg2Q05793 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Hspg2Q05793 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hspg2Q05793 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hspg2Q05793 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hspg2Q05793 Mir6349-201ENSMUST00000184059 97 ntBASIC13.33□□□□□ -0.28
Hspg2Q05793 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.33□□□□□ -0.28
Hspg2Q05793 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Grk6-206ENSMUST00000224995 2971 ntBASIC13.33□□□□□ -0.28
Hspg2Q05793 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.33□□□□□ -0.28
Hspg2Q05793 Gm18669-201ENSMUST00000216049 778 ntBASIC13.33□□□□□ -0.28
Hspg2Q05793 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hspg2Q05793 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hspg2Q05793 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hspg2Q05793 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hspg2Q05793 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Hspg2Q05793 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hspg2Q05793 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.31□□□□□ -0.28
Hspg2Q05793 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.31□□□□□ -0.28
Hspg2Q05793 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.31□□□□□ -0.28
Hspg2Q05793 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.31□□□□□ -0.28
Hspg2Q05793 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hspg2Q05793 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.31□□□□□ -0.28
Hspg2Q05793 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms