Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcbP82349 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.09■□□□□ 0.17
SgcbP82349 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.09■□□□□ 0.17
SgcbP82349 Gm10653-202ENSMUST00000139570 835 ntBASIC16.09■□□□□ 0.17
SgcbP82349 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SgcbP82349 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcbP82349 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcbP82349 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SgcbP82349 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcbP82349 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgcbP82349 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgcbP82349 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.08■□□□□ 0.17
SgcbP82349 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SgcbP82349 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SgcbP82349 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
SgcbP82349 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SgcbP82349 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.08■□□□□ 0.16
SgcbP82349 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgcbP82349 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SgcbP82349 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Gm37856-201ENSMUST00000191634 999 ntBASIC16.07■□□□□ 0.16
SgcbP82349 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SgcbP82349 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgcbP82349 Golph3-205ENSMUST00000228671 2842 ntBASIC16.07■□□□□ 0.16
SgcbP82349 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SgcbP82349 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SgcbP82349 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.06■□□□□ 0.16
SgcbP82349 Dio3-201ENSMUST00000097228 1449 ntBASIC16.06■□□□□ 0.16
SgcbP82349 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.06■□□□□ 0.16
SgcbP82349 Gm27275-201ENSMUST00000184318 272 ntBASIC16.06■□□□□ 0.16
SgcbP82349 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SgcbP82349 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SgcbP82349 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SgcbP82349 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.05■□□□□ 0.16
SgcbP82349 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.05■□□□□ 0.16
SgcbP82349 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.05■□□□□ 0.16
SgcbP82349 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.05■□□□□ 0.16
SgcbP82349 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.05■□□□□ 0.16
SgcbP82349 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SgcbP82349 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SgcbP82349 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SgcbP82349 Iqck-206ENSMUST00000208658 2891 ntBASIC16.05■□□□□ 0.16
SgcbP82349 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SgcbP82349 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms