Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.86■□□□□ 0.29
Six5P70178 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Flg-201ENSMUST00000050758 1488 ntBASIC16.86■□□□□ 0.29
Six5P70178 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Six5P70178 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.86■□□□□ 0.29
Six5P70178 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Six5P70178 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Six5P70178 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.85■□□□□ 0.29
Six5P70178 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.85■□□□□ 0.29
Six5P70178 Gm38285-201ENSMUST00000192928 922 ntBASIC16.85■□□□□ 0.29
Six5P70178 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Six5P70178 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Six5P70178 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Six5P70178 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Six5P70178 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Six5P70178 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.84■□□□□ 0.29
Six5P70178 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Six5P70178 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.83■□□□□ 0.29
Six5P70178 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Six5P70178 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.83■□□□□ 0.28
Six5P70178 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Six5P70178 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Six5P70178 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.83■□□□□ 0.28
Six5P70178 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.83■□□□□ 0.28
Six5P70178 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.83■□□□□ 0.28
Six5P70178 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.83■□□□□ 0.28
Six5P70178 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Six5P70178 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Six5P70178 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Six5P70178 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.82■□□□□ 0.28
Six5P70178 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Six5P70178 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Six5P70178 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.82■□□□□ 0.28
Six5P70178 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.82■□□□□ 0.28
Six5P70178 Zfp783-201ENSMUST00000095946 670 ntBASIC16.82■□□□□ 0.28
Six5P70178 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.82■□□□□ 0.28
Six5P70178 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.82■□□□□ 0.28
Six5P70178 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Gm12441-201ENSMUST00000121806 588 ntBASIC16.81■□□□□ 0.28
Six5P70178 Gm2559-201ENSMUST00000201323 363 ntBASIC16.81■□□□□ 0.28
Six5P70178 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Six5P70178 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Six5P70178 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms