Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lhx1P63006 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Lhx1P63006 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
Lhx1P63006 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lhx1P63006 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.68■□□□□ 0.42
Lhx1P63006 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.68■□□□□ 0.42
Lhx1P63006 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lhx1P63006 Tgds-204ENSMUST00000228543 1594 ntBASIC17.68■□□□□ 0.42
Lhx1P63006 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lhx1P63006 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lhx1P63006 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lhx1P63006 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Lhx1P63006 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.67■□□□□ 0.42
Lhx1P63006 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.67■□□□□ 0.42
Lhx1P63006 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lhx1P63006 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lhx1P63006 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lhx1P63006 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Lhx1P63006 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lhx1P63006 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.66■□□□□ 0.42
Lhx1P63006 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Lhx1P63006 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.65■□□□□ 0.42
Lhx1P63006 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Lhx1P63006 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx1P63006 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lhx1P63006 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx1P63006 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Lhx1P63006 Mir1199-201ENSMUST00000117015 119 ntBASIC17.65■□□□□ 0.42
Lhx1P63006 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.65■□□□□ 0.42
Lhx1P63006 Mir2861-201ENSMUST00000175539 82 ntBASIC17.65■□□□□ 0.42
Lhx1P63006 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx1P63006 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx1P63006 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lhx1P63006 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx1P63006 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.65■□□□□ 0.42
Lhx1P63006 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.65■□□□□ 0.42
Lhx1P63006 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lhx1P63006 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lhx1P63006 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lhx1P63006 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.64■□□□□ 0.41
Lhx1P63006 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.64■□□□□ 0.41
Lhx1P63006 Gm43183-201ENSMUST00000200632 547 ntBASIC17.64■□□□□ 0.41
Lhx1P63006 Gm42545-201ENSMUST00000202755 922 ntBASIC17.64■□□□□ 0.41
Lhx1P63006 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lhx1P63006 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.63■□□□□ 0.41
Lhx1P63006 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lhx1P63006 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.63■□□□□ 0.41
Lhx1P63006 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.63■□□□□ 0.41
Lhx1P63006 Gm10252-201ENSMUST00000209541 832 ntBASIC17.63■□□□□ 0.41
Lhx1P63006 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Lhx1P63006 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lhx1P63006 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lhx1P63006 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Lhx1P63006 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms