Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.78■□□□□ 0.12
Lsm6P62313 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm6P62313 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm6P62313 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Lsm6P62313 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Lsm6P62313 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Lsm6P62313 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.77■□□□□ 0.12
Lsm6P62313 Gm26524-201ENSMUST00000192339 390 ntBASIC15.77■□□□□ 0.12
Lsm6P62313 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.77■□□□□ 0.12
Lsm6P62313 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm6P62313 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.77■□□□□ 0.11
Lsm6P62313 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm6P62313 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm6P62313 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Lsm6P62313 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm6P62313 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm6P62313 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.76■□□□□ 0.11
Lsm6P62313 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm6P62313 Gm44549-201ENSMUST00000208351 577 ntBASIC15.76■□□□□ 0.11
Lsm6P62313 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.76■□□□□ 0.11
Lsm6P62313 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Lsm6P62313 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Lsm6P62313 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm6P62313 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.75■□□□□ 0.11
Lsm6P62313 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Gm2399-201ENSMUST00000104944 225 ntBASIC15.75■□□□□ 0.11
Lsm6P62313 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.75■□□□□ 0.11
Lsm6P62313 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Lsm6P62313 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.75■□□□□ 0.11
Lsm6P62313 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.75■□□□□ 0.11
Lsm6P62313 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.75■□□□□ 0.11
Lsm6P62313 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.75■□□□□ 0.11
Lsm6P62313 Rab3c-203ENSMUST00000224180 967 ntBASIC15.75■□□□□ 0.11
Lsm6P62313 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.75■□□□□ 0.11
Lsm6P62313 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.75■□□□□ 0.11
Lsm6P62313 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Lsm6P62313 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Lsm6P62313 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Lsm6P62313 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm6P62313 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.75■□□□□ 0.11
Lsm6P62313 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.74■□□□□ 0.11
Lsm6P62313 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.74■□□□□ 0.11
Lsm6P62313 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.74■□□□□ 0.11
Lsm6P62313 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Lsm6P62313 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Lsm6P62313 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Lsm6P62313 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
Lsm6P62313 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Lsm6P62313 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm6P62313 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Lsm6P62313 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Lsm6P62313 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms