Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lrch1P62046 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrch1P62046 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.28■■□□□ 1
Lrch1P62046 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrch1P62046 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrch1P62046 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Lrch1P62046 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrch1P62046 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Lrch1P62046 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.27■■□□□ 1
Lrch1P62046 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.27■■□□□ 1
Lrch1P62046 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.27■■□□□ 1
Lrch1P62046 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrch1P62046 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrch1P62046 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.26■□□□□ 0.99
Lrch1P62046 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Gm4974-201ENSMUST00000209974 875 ntBASIC21.26■□□□□ 0.99
Lrch1P62046 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.26■□□□□ 0.99
Lrch1P62046 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Lrch1P62046 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lrch1P62046 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrch1P62046 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.25■□□□□ 0.99
Lrch1P62046 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 Gm27389-201ENSMUST00000183622 195 ntBASIC21.25■□□□□ 0.99
Lrch1P62046 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.25■□□□□ 0.99
Lrch1P62046 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrch1P62046 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lrch1P62046 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lrch1P62046 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Lrch1P62046 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.24■□□□□ 0.99
Lrch1P62046 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrch1P62046 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lrch1P62046 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lrch1P62046 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrch1P62046 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.22■□□□□ 0.99
Lrch1P62046 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.22■□□□□ 0.99
Lrch1P62046 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.22■□□□□ 0.99
Lrch1P62046 Mir1668-201ENSMUST00000184114 107 ntBASIC21.22■□□□□ 0.99
Lrch1P62046 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.22■□□□□ 0.99
Lrch1P62046 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lrch1P62046 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Lrch1P62046 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrch1P62046 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.21■□□□□ 0.99
Lrch1P62046 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Lrch1P62046 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.21■□□□□ 0.99
Lrch1P62046 Gm17808-201ENSMUST00000200859 894 ntBASIC21.21■□□□□ 0.99
Lrch1P62046 Gm7370-201ENSMUST00000219471 767 ntBASIC21.21■□□□□ 0.99
Lrch1P62046 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lrch1P62046 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrch1P62046 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrch1P62046 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.2■□□□□ 0.99
Lrch1P62046 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lrch1P62046 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.2■□□□□ 0.98
Lrch1P62046 Gm7791-201ENSMUST00000219066 539 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms