Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.19■□□□□ 0.02
Cpne2P59108 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.19■□□□□ 0.02
Cpne2P59108 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.19■□□□□ 0.02
Cpne2P59108 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Cpne2P59108 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne2P59108 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpne2P59108 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cpne2P59108 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.18■□□□□ 0.02
Cpne2P59108 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cpne2P59108 Smad6-203ENSMUST00000179458 273 ntBASIC15.18■□□□□ 0.02
Cpne2P59108 Gm27454-201ENSMUST00000185090 204 ntBASIC15.18■□□□□ 0.02
Cpne2P59108 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne2P59108 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cpne2P59108 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.17■□□□□ 0.02
Cpne2P59108 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne2P59108 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cpne2P59108 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Gm43173-201ENSMUST00000202246 593 ntBASIC15.17■□□□□ 0.02
Cpne2P59108 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.17■□□□□ 0.02
Cpne2P59108 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cpne2P59108 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne2P59108 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.16■□□□□ 0.02
Cpne2P59108 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.16■□□□□ 0.02
Cpne2P59108 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Cpne2P59108 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.16■□□□□ 0.02
Cpne2P59108 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.16■□□□□ 0.02
Cpne2P59108 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cpne2P59108 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne2P59108 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.16■□□□□ 0.02
Cpne2P59108 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cpne2P59108 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.15■□□□□ 0.02
Cpne2P59108 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cpne2P59108 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cpne2P59108 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cpne2P59108 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne2P59108 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cpne2P59108 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms