Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.07■□□□□ 0.64
NcanP55066 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NcanP55066 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NcanP55066 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.07■□□□□ 0.64
NcanP55066 Gm34391-201ENSMUST00000203706 907 ntBASIC19.07■□□□□ 0.64
NcanP55066 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NcanP55066 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.06■□□□□ 0.64
NcanP55066 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NcanP55066 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NcanP55066 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
NcanP55066 Gm27357-201ENSMUST00000183754 135 ntBASIC19.06■□□□□ 0.64
NcanP55066 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.06■□□□□ 0.64
NcanP55066 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NcanP55066 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.05■□□□□ 0.64
NcanP55066 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NcanP55066 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.05■□□□□ 0.64
NcanP55066 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.05■□□□□ 0.64
NcanP55066 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NcanP55066 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NcanP55066 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NcanP55066 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.05■□□□□ 0.64
NcanP55066 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NcanP55066 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NcanP55066 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NcanP55066 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NcanP55066 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Gm11950-201ENSMUST00000121615 838 ntBASIC19.04■□□□□ 0.64
NcanP55066 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.04■□□□□ 0.64
NcanP55066 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.04■□□□□ 0.64
NcanP55066 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NcanP55066 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NcanP55066 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NcanP55066 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NcanP55066 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NcanP55066 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NcanP55066 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.03■□□□□ 0.64
NcanP55066 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
NcanP55066 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
NcanP55066 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
NcanP55066 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NcanP55066 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.03■□□□□ 0.64
NcanP55066 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NcanP55066 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NcanP55066 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.02■□□□□ 0.64
NcanP55066 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NcanP55066 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Gm7213-201ENSMUST00000215977 950 ntBASIC19.02■□□□□ 0.64
NcanP55066 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
NcanP55066 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NcanP55066 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
NcanP55066 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NcanP55066 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.01■□□□□ 0.63
NcanP55066 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NcanP55066 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NcanP55066 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NcanP55066 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NcanP55066 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.01■□□□□ 0.63
NcanP55066 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms