Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.23■□□□□ 0.03
Lhx4P53776 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.23■□□□□ 0.03
Lhx4P53776 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lhx4P53776 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.22■□□□□ 0.03
Lhx4P53776 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.22■□□□□ 0.03
Lhx4P53776 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Lhx4P53776 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lhx4P53776 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lhx4P53776 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lhx4P53776 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.21■□□□□ 0.03
Lhx4P53776 Gm6211-202ENSMUST00000167849 925 ntBASIC15.21■□□□□ 0.03
Lhx4P53776 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.21■□□□□ 0.03
Lhx4P53776 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.21■□□□□ 0.03
Lhx4P53776 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lhx4P53776 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lhx4P53776 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lhx4P53776 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lhx4P53776 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lhx4P53776 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
Lhx4P53776 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lhx4P53776 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lhx4P53776 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lhx4P53776 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.2■□□□□ 0.02
Lhx4P53776 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.2■□□□□ 0.02
Lhx4P53776 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lhx4P53776 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.2■□□□□ 0.02
Lhx4P53776 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lhx4P53776 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lhx4P53776 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.19■□□□□ 0.02
Lhx4P53776 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lhx4P53776 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lhx4P53776 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lhx4P53776 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lhx4P53776 Gm13148-201ENSMUST00000118892 745 ntBASIC15.19■□□□□ 0.02
Lhx4P53776 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.19■□□□□ 0.02
Lhx4P53776 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.19■□□□□ 0.02
Lhx4P53776 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lhx4P53776 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx4P53776 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx4P53776 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lhx4P53776 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms