Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.94□□□□□ -0.02
Nkx2-1P50220 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Nkx2-1P50220 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-1P50220 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.92□□□□□ -0.02
Nkx2-1P50220 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-1P50220 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-1P50220 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms