Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.23■□□□□ 0.35
Sox18P43680 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sox18P43680 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sox18P43680 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.22■□□□□ 0.35
Sox18P43680 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Sox18P43680 Gm25016-201ENSMUST00000158399 131 ntBASIC17.22■□□□□ 0.35
Sox18P43680 Gm17661-201ENSMUST00000170317 270 ntBASIC17.22■□□□□ 0.35
Sox18P43680 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Gm27463-201ENSMUST00000183569 57 ntBASIC17.22■□□□□ 0.35
Sox18P43680 Gm44771-201ENSMUST00000206975 626 ntBASIC17.22■□□□□ 0.35
Sox18P43680 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.22■□□□□ 0.35
Sox18P43680 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox18P43680 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.21■□□□□ 0.35
Sox18P43680 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Sox18P43680 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Sox18P43680 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox18P43680 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.21■□□□□ 0.35
Sox18P43680 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sox18P43680 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sox18P43680 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.2■□□□□ 0.34
Sox18P43680 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.2■□□□□ 0.34
Sox18P43680 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox18P43680 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sox18P43680 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sox18P43680 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sox18P43680 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sox18P43680 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox18P43680 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox18P43680 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.19■□□□□ 0.34
Sox18P43680 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.19■□□□□ 0.34
Sox18P43680 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sox18P43680 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.19■□□□□ 0.34
Sox18P43680 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sox18P43680 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 Gm22697-201ENSMUST00000175194 63 ntBASIC17.18■□□□□ 0.34
Sox18P43680 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Sox18P43680 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Sox18P43680 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox18P43680 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.18■□□□□ 0.34
Sox18P43680 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.18■□□□□ 0.34
Sox18P43680 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sox18P43680 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sox18P43680 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sox18P43680 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sox18P43680 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox18P43680 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.17■□□□□ 0.34
Sox18P43680 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms