Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.54■□□□□ 0.56
Msh2P43247 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Msh2P43247 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh2P43247 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Msh2P43247 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
Msh2P43247 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.53■□□□□ 0.56
Msh2P43247 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.53■□□□□ 0.56
Msh2P43247 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.53■□□□□ 0.56
Msh2P43247 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Msh2P43247 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh2P43247 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Msh2P43247 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Msh2P43247 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.52■□□□□ 0.56
Msh2P43247 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Msh2P43247 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh2P43247 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh2P43247 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh2P43247 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.51■□□□□ 0.55
Msh2P43247 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.51■□□□□ 0.55
Msh2P43247 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Msh2P43247 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.51■□□□□ 0.55
Msh2P43247 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Msh2P43247 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Msh2P43247 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Msh2P43247 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh2P43247 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Msh2P43247 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.5■□□□□ 0.55
Msh2P43247 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.5■□□□□ 0.55
Msh2P43247 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh2P43247 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.49■□□□□ 0.55
Msh2P43247 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Msh2P43247 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.49■□□□□ 0.55
Msh2P43247 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Msh2P43247 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msh2P43247 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Msh2P43247 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.48■□□□□ 0.55
Msh2P43247 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
Msh2P43247 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh2P43247 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Msh2P43247 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms