Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fen1P39749 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
Fen1P39749 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fen1P39749 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fen1P39749 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Fen1P39749 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Gm8493-201ENSMUST00000196881 489 ntBASIC18.08■□□□□ 0.48
Fen1P39749 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Fen1P39749 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fen1P39749 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.07■□□□□ 0.48
Fen1P39749 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Fen1P39749 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Fen1P39749 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Fen1P39749 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.07■□□□□ 0.48
Fen1P39749 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Fen1P39749 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.07■□□□□ 0.48
Fen1P39749 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.07■□□□□ 0.48
Fen1P39749 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.07■□□□□ 0.48
Fen1P39749 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fen1P39749 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Fen1P39749 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Fen1P39749 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Fen1P39749 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fen1P39749 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Fen1P39749 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Fen1P39749 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Fen1P39749 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.05■□□□□ 0.48
Fen1P39749 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Gm6139-201ENSMUST00000079261 882 ntBASIC18.05■□□□□ 0.48
Fen1P39749 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.05■□□□□ 0.48
Fen1P39749 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fen1P39749 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Fen1P39749 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.04■□□□□ 0.48
Fen1P39749 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Fen1P39749 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Fen1P39749 Gm38205-201ENSMUST00000192243 258 ntBASIC18.04■□□□□ 0.48
Fen1P39749 Gm43173-201ENSMUST00000202246 593 ntBASIC18.04■□□□□ 0.48
Fen1P39749 Gm40848-201ENSMUST00000221998 324 ntBASIC18.04■□□□□ 0.48
Fen1P39749 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.04■□□□□ 0.48
Fen1P39749 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Fen1P39749 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Fen1P39749 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms