Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Gm10849-201ENSMUST00000100397 618 ntBASIC15.14■□□□□ 0.01
Foxa2P35583 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Gm18284-201ENSMUST00000172604 624 ntBASIC15.14■□□□□ 0.01
Foxa2P35583 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.14■□□□□ 0.01
Foxa2P35583 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Foxa2P35583 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa2P35583 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.14■□□□□ 0.01
Foxa2P35583 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Foxa2P35583 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.13■□□□□ 0.01
Foxa2P35583 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa2P35583 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.12■□□□□ 0.01
Foxa2P35583 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Foxa2P35583 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.12■□□□□ 0.01
Foxa2P35583 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.12■□□□□ 0.01
Foxa2P35583 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.12■□□□□ 0.01
Foxa2P35583 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Foxa2P35583 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.12■□□□□ 0.01
Foxa2P35583 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa2P35583 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.11■□□□□ 0.01
Foxa2P35583 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.11■□□□□ 0.01
Foxa2P35583 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Foxa2P35583 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Foxa2P35583 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.11■□□□□ 0.01
Foxa2P35583 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.11■□□□□ 0.01
Foxa2P35583 Gm6365-201ENSMUST00000054711 744 ntBASIC15.11■□□□□ 0.01
Foxa2P35583 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.11■□□□□ 0.01
Foxa2P35583 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.11■□□□□ 0.01
Foxa2P35583 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa2P35583 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.1■□□□□ 0.01
Foxa2P35583 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.1■□□□□ 0.01
Foxa2P35583 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.1■□□□□ 0.01
Foxa2P35583 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Foxa2P35583 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Foxa2P35583 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.09■□□□□ 0.01
Foxa2P35583 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Foxa2P35583 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Foxa2P35583 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Foxa2P35583 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Foxa2P35583 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Foxa2P35583 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Foxa2P35583 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.09■□□□□ 0.01
Foxa2P35583 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms