Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Thbs1P35441 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Thbs1P35441 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.63■□□□□ 0.25
Thbs1P35441 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Thbs1P35441 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Thbs1P35441 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.63■□□□□ 0.25
Thbs1P35441 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Thbs1P35441 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Thbs1P35441 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.62■□□□□ 0.25
Thbs1P35441 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.62■□□□□ 0.25
Thbs1P35441 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Thbs1P35441 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Thbs1P35441 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Thbs1P35441 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thbs1P35441 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Thbs1P35441 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Gm27011-201ENSMUST00000182352 972 ntBASIC16.61■□□□□ 0.25
Thbs1P35441 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.61■□□□□ 0.25
Thbs1P35441 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Thbs1P35441 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thbs1P35441 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Gm8969-201ENSMUST00000199694 526 ntBASIC16.6■□□□□ 0.25
Thbs1P35441 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.6■□□□□ 0.25
Thbs1P35441 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.6■□□□□ 0.25
Thbs1P35441 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.6■□□□□ 0.25
Thbs1P35441 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thbs1P35441 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Thbs1P35441 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Thbs1P35441 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.59■□□□□ 0.25
Thbs1P35441 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
Thbs1P35441 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.59■□□□□ 0.25
Thbs1P35441 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.59■□□□□ 0.25
Thbs1P35441 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.59■□□□□ 0.25
Thbs1P35441 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.59■□□□□ 0.25
Thbs1P35441 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thbs1P35441 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.59■□□□□ 0.25
Thbs1P35441 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Thbs1P35441 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thbs1P35441 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.58■□□□□ 0.25
Thbs1P35441 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thbs1P35441 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thbs1P35441 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Thbs1P35441 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.58■□□□□ 0.24
Thbs1P35441 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thbs1P35441 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.58■□□□□ 0.24
Thbs1P35441 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.58■□□□□ 0.24
Thbs1P35441 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Thbs1P35441 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Thbs1P35441 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thbs1P35441 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thbs1P35441 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Thbs1P35441 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Thbs1P35441 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms