Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nedd8P29595 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nedd8P29595 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nedd8P29595 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nedd8P29595 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nedd8P29595 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nedd8P29595 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.7■□□□□ 0.26
Nedd8P29595 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.7■□□□□ 0.26
Nedd8P29595 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Nedd8P29595 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.7■□□□□ 0.26
Nedd8P29595 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nedd8P29595 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.69■□□□□ 0.26
Nedd8P29595 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.69■□□□□ 0.26
Nedd8P29595 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.69■□□□□ 0.26
Nedd8P29595 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nedd8P29595 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.68■□□□□ 0.26
Nedd8P29595 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Nedd8P29595 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nedd8P29595 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Nedd8P29595 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Nedd8P29595 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Nedd8P29595 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Nedd8P29595 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nedd8P29595 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nedd8P29595 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
Nedd8P29595 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nedd8P29595 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nedd8P29595 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nedd8P29595 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nedd8P29595 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nedd8P29595 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.66■□□□□ 0.26
Nedd8P29595 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nedd8P29595 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.66■□□□□ 0.26
Nedd8P29595 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.66■□□□□ 0.26
Nedd8P29595 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Nedd8P29595 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nedd8P29595 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nedd8P29595 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nedd8P29595 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.65■□□□□ 0.26
Nedd8P29595 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms