Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NdnP25233 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NdnP25233 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.48□□□□□ -0.09
NdnP25233 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.48□□□□□ -0.09
NdnP25233 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
NdnP25233 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
NdnP25233 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NdnP25233 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NdnP25233 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NdnP25233 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.47□□□□□ -0.09
NdnP25233 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NdnP25233 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.47□□□□□ -0.09
NdnP25233 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NdnP25233 Mir6236-201ENSMUST00000184437 123 ntBASIC14.47□□□□□ -0.09
NdnP25233 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.47□□□□□ -0.09
NdnP25233 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.47□□□□□ -0.09
NdnP25233 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NdnP25233 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NdnP25233 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.46□□□□□ -0.09
NdnP25233 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NdnP25233 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
NdnP25233 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NdnP25233 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.46□□□□□ -0.09
NdnP25233 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.46□□□□□ -0.09
NdnP25233 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.1
NdnP25233 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NdnP25233 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NdnP25233 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NdnP25233 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NdnP25233 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NdnP25233 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NdnP25233 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NdnP25233 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NdnP25233 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.45□□□□□ -0.1
NdnP25233 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NdnP25233 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NdnP25233 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NdnP25233 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NdnP25233 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.44□□□□□ -0.1
NdnP25233 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.44□□□□□ -0.1
NdnP25233 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NdnP25233 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NdnP25233 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms