Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TP20293 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TP20293 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.93■□□□□ 0.3
TP20293 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.93■□□□□ 0.3
TP20293 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TP20293 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TP20293 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.93■□□□□ 0.3
TP20293 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TP20293 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TP20293 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Gm10602-201ENSMUST00000098239 609 ntBASIC16.92■□□□□ 0.3
TP20293 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.92■□□□□ 0.3
TP20293 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TP20293 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TP20293 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TP20293 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.92■□□□□ 0.3
TP20293 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TP20293 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.91■□□□□ 0.3
TP20293 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.91■□□□□ 0.3
TP20293 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TP20293 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TP20293 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TP20293 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.91■□□□□ 0.3
TP20293 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TP20293 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TP20293 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TP20293 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TP20293 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TP20293 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TP20293 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TP20293 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TP20293 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.9■□□□□ 0.3
TP20293 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.9■□□□□ 0.3
TP20293 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TP20293 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TP20293 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TP20293 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
TP20293 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TP20293 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TP20293 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TP20293 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TP20293 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TP20293 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TP20293 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.89■□□□□ 0.29
TP20293 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TP20293 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TP20293 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.89■□□□□ 0.29
TP20293 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TP20293 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.88■□□□□ 0.29
TP20293 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.88■□□□□ 0.29
TP20293 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.88■□□□□ 0.29
TP20293 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TP20293 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TP20293 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Fst-202ENSMUST00000223640 2612 ntBASIC16.88■□□□□ 0.29
TP20293 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TP20293 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TP20293 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TP20293 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TP20293 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TP20293 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TP20293 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TP20293 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TP20293 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TP20293 Gm26524-201ENSMUST00000192339 390 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms