Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nid1P10493 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nid1P10493 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nid1P10493 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.89■□□□□ 0.29
Nid1P10493 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nid1P10493 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nid1P10493 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Nid1P10493 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.88■□□□□ 0.29
Nid1P10493 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nid1P10493 Gm6211-202ENSMUST00000167849 925 ntBASIC16.88■□□□□ 0.29
Nid1P10493 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.88■□□□□ 0.29
Nid1P10493 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.88■□□□□ 0.29
Nid1P10493 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.88■□□□□ 0.29
Nid1P10493 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nid1P10493 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nid1P10493 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nid1P10493 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
Nid1P10493 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Gm8495-201ENSMUST00000188740 694 ntBASIC16.87■□□□□ 0.29
Nid1P10493 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.87■□□□□ 0.29
Nid1P10493 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nid1P10493 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nid1P10493 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.86■□□□□ 0.29
Nid1P10493 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.86■□□□□ 0.29
Nid1P10493 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nid1P10493 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.86■□□□□ 0.29
Nid1P10493 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.85■□□□□ 0.29
Nid1P10493 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Gm42569-201ENSMUST00000200539 472 ntBASIC16.85■□□□□ 0.29
Nid1P10493 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nid1P10493 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Nid1P10493 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nid1P10493 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.84■□□□□ 0.29
Nid1P10493 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.84■□□□□ 0.29
Nid1P10493 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.84■□□□□ 0.29
Nid1P10493 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.84■□□□□ 0.29
Nid1P10493 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nid1P10493 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nid1P10493 Idnk-204ENSMUST00000226010 1898 ntBASIC16.84■□□□□ 0.29
Nid1P10493 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.84■□□□□ 0.29
Nid1P10493 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nid1P10493 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.83■□□□□ 0.28
Nid1P10493 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.83■□□□□ 0.28
Nid1P10493 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nid1P10493 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.83■□□□□ 0.28
Nid1P10493 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.83■□□□□ 0.28
Nid1P10493 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.83■□□□□ 0.28
Nid1P10493 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Nid1P10493 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Nid1P10493 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nid1P10493 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nid1P10493 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms