Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.82■□□□□ 0.28
Tulp3O88413 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.82■□□□□ 0.28
Tulp3O88413 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tulp3O88413 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tulp3O88413 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tulp3O88413 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Tulp3O88413 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tulp3O88413 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.81■□□□□ 0.28
Tulp3O88413 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Tulp3O88413 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.81■□□□□ 0.28
Tulp3O88413 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.81■□□□□ 0.28
Tulp3O88413 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tulp3O88413 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Tulp3O88413 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tulp3O88413 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tulp3O88413 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tulp3O88413 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.79■□□□□ 0.28
Tulp3O88413 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Tulp3O88413 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Tulp3O88413 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tulp3O88413 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tulp3O88413 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Tulp3O88413 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.78■□□□□ 0.28
Tulp3O88413 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Tulp3O88413 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tulp3O88413 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tulp3O88413 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tulp3O88413 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tulp3O88413 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Tulp3O88413 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tulp3O88413 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.77■□□□□ 0.28
Tulp3O88413 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tulp3O88413 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tulp3O88413 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.77■□□□□ 0.27
Tulp3O88413 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms