Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col5a1O88207 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.36■□□□□ 0.21
Col5a1O88207 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col5a1O88207 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.35■□□□□ 0.21
Col5a1O88207 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Gm45058-201ENSMUST00000205810 766 ntBASIC16.35■□□□□ 0.21
Col5a1O88207 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.35■□□□□ 0.21
Col5a1O88207 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.35■□□□□ 0.21
Col5a1O88207 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Col5a1O88207 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.35■□□□□ 0.21
Col5a1O88207 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.35■□□□□ 0.21
Col5a1O88207 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col5a1O88207 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col5a1O88207 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Col5a1O88207 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col5a1O88207 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col5a1O88207 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col5a1O88207 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col5a1O88207 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col5a1O88207 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Col5a1O88207 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col5a1O88207 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.34■□□□□ 0.21
Col5a1O88207 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col5a1O88207 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col5a1O88207 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col5a1O88207 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col5a1O88207 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col5a1O88207 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col5a1O88207 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col5a1O88207 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col5a1O88207 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col5a1O88207 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Col5a1O88207 Gm7153-201ENSMUST00000117092 455 ntBASIC16.33■□□□□ 0.2
Col5a1O88207 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.33■□□□□ 0.2
Col5a1O88207 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col5a1O88207 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col5a1O88207 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col5a1O88207 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Col5a1O88207 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Col5a1O88207 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col5a1O88207 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col5a1O88207 Gm5867-201ENSMUST00000063197 592 ntBASIC16.32■□□□□ 0.2
Col5a1O88207 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.32■□□□□ 0.2
Col5a1O88207 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col5a1O88207 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col5a1O88207 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col5a1O88207 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.31■□□□□ 0.2
Col5a1O88207 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col5a1O88207 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col5a1O88207 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Col5a1O88207 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.31■□□□□ 0.2
Col5a1O88207 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.31■□□□□ 0.2
Col5a1O88207 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.31■□□□□ 0.2
Col5a1O88207 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col5a1O88207 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col5a1O88207 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.3■□□□□ 0.2
Col5a1O88207 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col5a1O88207 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col5a1O88207 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col5a1O88207 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col5a1O88207 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col5a1O88207 Gm17661-201ENSMUST00000170317 270 ntBASIC16.29■□□□□ 0.2
Col5a1O88207 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.29■□□□□ 0.2
Col5a1O88207 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.29■□□□□ 0.2
Col5a1O88207 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.29■□□□□ 0.2
Col5a1O88207 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a1O88207 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a1O88207 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a1O88207 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a1O88207 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col5a1O88207 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a1O88207 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.28■□□□□ 0.2
Col5a1O88207 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a1O88207 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.28■□□□□ 0.2
Col5a1O88207 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms