Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ttc3O88196 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc3O88196 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.95■□□□□ 0.62
Ttc3O88196 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc3O88196 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.95■□□□□ 0.62
Ttc3O88196 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ttc3O88196 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc3O88196 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ttc3O88196 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.94■□□□□ 0.62
Ttc3O88196 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc3O88196 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc3O88196 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ttc3O88196 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ttc3O88196 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.93■□□□□ 0.62
Ttc3O88196 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ttc3O88196 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.92■□□□□ 0.62
Ttc3O88196 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ttc3O88196 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ttc3O88196 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.92■□□□□ 0.62
Ttc3O88196 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.92■□□□□ 0.62
Ttc3O88196 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ttc3O88196 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.91■□□□□ 0.62
Ttc3O88196 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ttc3O88196 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ttc3O88196 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
Ttc3O88196 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ttc3O88196 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.89■□□□□ 0.61
Ttc3O88196 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ttc3O88196 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ttc3O88196 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ttc3O88196 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc3O88196 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.88■□□□□ 0.61
Ttc3O88196 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc3O88196 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc3O88196 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.88■□□□□ 0.61
Ttc3O88196 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ttc3O88196 Fst-202ENSMUST00000223640 2612 ntBASIC18.88■□□□□ 0.61
Ttc3O88196 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc3O88196 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.88■□□□□ 0.61
Ttc3O88196 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Ttc3O88196 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.88■□□□□ 0.61
Ttc3O88196 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ttc3O88196 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Ttc3O88196 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ttc3O88196 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.88■□□□□ 0.61
Ttc3O88196 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc3O88196 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ttc3O88196 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.87■□□□□ 0.61
Ttc3O88196 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms