Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pja1O55176 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.05■□□□□ 0.64
Pja1O55176 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pja1O55176 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pja1O55176 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pja1O55176 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pja1O55176 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pja1O55176 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pja1O55176 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pja1O55176 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.04■□□□□ 0.64
Pja1O55176 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.04■□□□□ 0.64
Pja1O55176 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Pja1O55176 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pja1O55176 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pja1O55176 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.03■□□□□ 0.64
Pja1O55176 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.03■□□□□ 0.64
Pja1O55176 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pja1O55176 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.03■□□□□ 0.64
Pja1O55176 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pja1O55176 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pja1O55176 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pja1O55176 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.02■□□□□ 0.64
Pja1O55176 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pja1O55176 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pja1O55176 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pja1O55176 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pja1O55176 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
Pja1O55176 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pja1O55176 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pja1O55176 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pja1O55176 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Pja1O55176 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pja1O55176 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pja1O55176 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pja1O55176 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pja1O55176 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pja1O55176 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.01■□□□□ 0.63
Pja1O55176 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pja1O55176 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pja1O55176 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pja1O55176 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pja1O55176 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pja1O55176 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.99■□□□□ 0.63
Pja1O55176 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pja1O55176 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pja1O55176 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.98■□□□□ 0.63
Pja1O55176 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.98■□□□□ 0.63
Pja1O55176 Gm6420-201ENSMUST00000193885 723 ntBASIC18.98■□□□□ 0.63
Pja1O55176 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.98■□□□□ 0.63
Pja1O55176 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Pja1O55176 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pja1O55176 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pja1O55176 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pja1O55176 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms