Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prom1O54990 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.92■□□□□ 0.78
Prom1O54990 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Prom1O54990 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 Gm6659-201ENSMUST00000174752 547 ntBASIC19.92■□□□□ 0.78
Prom1O54990 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Prom1O54990 Gm10517-202ENSMUST00000192970 758 ntBASIC19.92■□□□□ 0.78
Prom1O54990 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Prom1O54990 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prom1O54990 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Prom1O54990 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prom1O54990 BC021767-201ENSMUST00000126387 1716 ntBASIC19.91■□□□□ 0.78
Prom1O54990 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prom1O54990 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prom1O54990 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.91■□□□□ 0.78
Prom1O54990 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prom1O54990 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Prom1O54990 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.91■□□□□ 0.78
Prom1O54990 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prom1O54990 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prom1O54990 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.9■□□□□ 0.78
Prom1O54990 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.9■□□□□ 0.78
Prom1O54990 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Prom1O54990 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prom1O54990 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Prom1O54990 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.89■□□□□ 0.77
Prom1O54990 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.89■□□□□ 0.77
Prom1O54990 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.89■□□□□ 0.77
Prom1O54990 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.89■□□□□ 0.77
Prom1O54990 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.89■□□□□ 0.77
Prom1O54990 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prom1O54990 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prom1O54990 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prom1O54990 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prom1O54990 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prom1O54990 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.88■□□□□ 0.77
Prom1O54990 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prom1O54990 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.87■□□□□ 0.77
Prom1O54990 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prom1O54990 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prom1O54990 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prom1O54990 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prom1O54990 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.87■□□□□ 0.77
Prom1O54990 Gm21362-201ENSMUST00000194272 928 ntBASIC19.87■□□□□ 0.77
Prom1O54990 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.87■□□□□ 0.77
Prom1O54990 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.87■□□□□ 0.77
Prom1O54990 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.87■□□□□ 0.77
Prom1O54990 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.87■□□□□ 0.77
Prom1O54990 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prom1O54990 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prom1O54990 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Prom1O54990 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Prom1O54990 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prom1O54990 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prom1O54990 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Prom1O54990 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Prom1O54990 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Prom1O54990 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.85■□□□□ 0.77
Prom1O54990 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prom1O54990 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms