Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Per1O35973 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.58■□□□□ 0.73
Per1O35973 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Per1O35973 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Per1O35973 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.58■□□□□ 0.72
Per1O35973 Gm715-201ENSMUST00000117865 831 ntBASIC19.58■□□□□ 0.72
Per1O35973 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.58■□□□□ 0.72
Per1O35973 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Per1O35973 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.58■□□□□ 0.72
Per1O35973 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Per1O35973 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per1O35973 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per1O35973 Fst-202ENSMUST00000223640 2612 ntBASIC19.58■□□□□ 0.72
Per1O35973 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per1O35973 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Per1O35973 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Per1O35973 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Gm10418-201ENSMUST00000100943 576 ntBASIC19.57■□□□□ 0.72
Per1O35973 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.57■□□□□ 0.72
Per1O35973 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.57■□□□□ 0.72
Per1O35973 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.57■□□□□ 0.72
Per1O35973 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Per1O35973 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.57■□□□□ 0.72
Per1O35973 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.57■□□□□ 0.72
Per1O35973 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Per1O35973 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Per1O35973 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Per1O35973 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Gm12382-201ENSMUST00000122005 922 ntBASIC19.55■□□□□ 0.72
Per1O35973 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.55■□□□□ 0.72
Per1O35973 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.55■□□□□ 0.72
Per1O35973 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Per1O35973 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Per1O35973 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.55■□□□□ 0.72
Per1O35973 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Per1O35973 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Per1O35973 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Per1O35973 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Per1O35973 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Per1O35973 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Per1O35973 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Per1O35973 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.53■□□□□ 0.72
Per1O35973 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms