Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Matn3O35701 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Matn3O35701 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Matn3O35701 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Matn3O35701 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.35■□□□□ 0.21
Matn3O35701 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Matn3O35701 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Matn3O35701 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Matn3O35701 Haglr-201ENSMUST00000100000 2085 ntBASIC16.34■□□□□ 0.21
Matn3O35701 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.34■□□□□ 0.21
Matn3O35701 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Matn3O35701 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Matn3O35701 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Matn3O35701 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Matn3O35701 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Gm7860-201ENSMUST00000121190 879 ntBASIC16.33■□□□□ 0.2
Matn3O35701 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Matn3O35701 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Matn3O35701 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.33■□□□□ 0.2
Matn3O35701 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Matn3O35701 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Matn3O35701 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.33■□□□□ 0.2
Matn3O35701 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Matn3O35701 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Matn3O35701 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Matn3O35701 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Matn3O35701 Gm45417-201ENSMUST00000209533 758 ntBASIC16.32■□□□□ 0.2
Matn3O35701 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Matn3O35701 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Matn3O35701 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.31■□□□□ 0.2
Matn3O35701 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.31■□□□□ 0.2
Matn3O35701 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Matn3O35701 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.31■□□□□ 0.2
Matn3O35701 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.31■□□□□ 0.2
Matn3O35701 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Matn3O35701 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Matn3O35701 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Matn3O35701 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.3■□□□□ 0.2
Matn3O35701 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Matn3O35701 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Matn3O35701 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.3■□□□□ 0.2
Matn3O35701 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.29■□□□□ 0.2
Matn3O35701 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Matn3O35701 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
Matn3O35701 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Matn3O35701 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms