Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stx1aO35526 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Stx1aO35526 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.27■□□□□ 0.83
Stx1aO35526 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
Stx1aO35526 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Stx1aO35526 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Stx1aO35526 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Stx1aO35526 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Gm45417-201ENSMUST00000209533 758 ntBASIC20.26■□□□□ 0.83
Stx1aO35526 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Stx1aO35526 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.26■□□□□ 0.83
Stx1aO35526 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stx1aO35526 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Gm13534-201ENSMUST00000121169 513 ntBASIC20.25■□□□□ 0.83
Stx1aO35526 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.25■□□□□ 0.83
Stx1aO35526 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Stx1aO35526 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stx1aO35526 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Stx1aO35526 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Stx1aO35526 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.24■□□□□ 0.83
Stx1aO35526 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.24■□□□□ 0.83
Stx1aO35526 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.24■□□□□ 0.83
Stx1aO35526 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.24■□□□□ 0.83
Stx1aO35526 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stx1aO35526 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.23■□□□□ 0.83
Stx1aO35526 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.23■□□□□ 0.83
Stx1aO35526 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Stx1aO35526 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stx1aO35526 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Stx1aO35526 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.22■□□□□ 0.83
Stx1aO35526 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Stx1aO35526 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Stx1aO35526 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stx1aO35526 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Stx1aO35526 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Stx1aO35526 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.21■□□□□ 0.83
Stx1aO35526 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stx1aO35526 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
Stx1aO35526 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stx1aO35526 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms