Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.63■□□□□ 0.25
Capn1O35350 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.63■□□□□ 0.25
Capn1O35350 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Capn1O35350 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Capn1O35350 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Capn1O35350 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Capn1O35350 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Capn1O35350 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.62■□□□□ 0.25
Capn1O35350 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.62■□□□□ 0.25
Capn1O35350 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.62■□□□□ 0.25
Capn1O35350 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Capn1O35350 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
Capn1O35350 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Capn1O35350 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Capn1O35350 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.61■□□□□ 0.25
Capn1O35350 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.61■□□□□ 0.25
Capn1O35350 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.61■□□□□ 0.25
Capn1O35350 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Capn1O35350 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Rarb-207ENSMUST00000225921 2756 ntBASIC16.61■□□□□ 0.25
Capn1O35350 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Capn1O35350 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.61■□□□□ 0.25
Capn1O35350 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Capn1O35350 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Capn1O35350 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.6■□□□□ 0.25
Capn1O35350 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.6■□□□□ 0.25
Capn1O35350 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Capn1O35350 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.6■□□□□ 0.25
Capn1O35350 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Capn1O35350 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Capn1O35350 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Capn1O35350 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.6■□□□□ 0.25
Capn1O35350 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Capn1O35350 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 BC021767-201ENSMUST00000126387 1716 ntBASIC16.59■□□□□ 0.25
Capn1O35350 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Gm2399-201ENSMUST00000104944 225 ntBASIC16.59■□□□□ 0.25
Capn1O35350 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Capn1O35350 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Capn1O35350 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Capn1O35350 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Capn1O35350 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Capn1O35350 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms