Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gfra3O35118 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gfra3O35118 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gfra3O35118 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Gfra3O35118 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.55■□□□□ 0.08
Gfra3O35118 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.55■□□□□ 0.08
Gfra3O35118 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.55■□□□□ 0.08
Gfra3O35118 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Gfra3O35118 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.54■□□□□ 0.08
Gfra3O35118 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.54■□□□□ 0.08
Gfra3O35118 Gm10698-201ENSMUST00000182663 604 ntBASIC15.54■□□□□ 0.08
Gfra3O35118 Gm38285-201ENSMUST00000192928 922 ntBASIC15.54■□□□□ 0.08
Gfra3O35118 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.54■□□□□ 0.08
Gfra3O35118 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.54■□□□□ 0.08
Gfra3O35118 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Gfra3O35118 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.54■□□□□ 0.08
Gfra3O35118 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Gfra3O35118 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.53■□□□□ 0.08
Gfra3O35118 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.53■□□□□ 0.08
Gfra3O35118 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.53■□□□□ 0.08
Gfra3O35118 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.53■□□□□ 0.08
Gfra3O35118 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Gfra3O35118 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Gfra3O35118 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Gfra3O35118 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.53■□□□□ 0.08
Gfra3O35118 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Gfra3O35118 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.52■□□□□ 0.08
Gfra3O35118 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.52■□□□□ 0.08
Gfra3O35118 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.52■□□□□ 0.08
Gfra3O35118 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Gfra3O35118 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gfra3O35118 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Gfra3O35118 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.52■□□□□ 0.07
Gfra3O35118 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gfra3O35118 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gfra3O35118 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gfra3O35118 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gfra3O35118 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gfra3O35118 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.51■□□□□ 0.07
Gfra3O35118 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.51■□□□□ 0.07
Gfra3O35118 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Gfra3O35118 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gfra3O35118 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gfra3O35118 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.51■□□□□ 0.07
Gfra3O35118 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gfra3O35118 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gfra3O35118 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Gfra3O35118 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Gfra3O35118 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Gfra3O35118 Gm15378-201ENSMUST00000121894 207 ntBASIC15.5■□□□□ 0.07
Gfra3O35118 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms