Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Odf3b-204ENSMUST00000227834 930 ntBASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm4340L7N2C4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm4340L7N2C4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Timm23-208ENSMUST00000226683 750 ntBASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Gm4340L7N2C4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Gm4340L7N2C4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Gm4340L7N2C4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Gm3375-201ENSMUST00000203929 796 ntBASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm4340L7N2C4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Gm4340L7N2C4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gm4340L7N2C4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm4340L7N2C4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms