Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Sgo2bJ3QMK1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Sgo2bJ3QMK1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sgo2bJ3QMK1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.94■□□□□ 0.46
Sgo2bJ3QMK1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sgo2bJ3QMK1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sgo2bJ3QMK1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Gm13148-201ENSMUST00000118892 745 ntBASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Sgo2bJ3QMK1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sgo2bJ3QMK1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sgo2bJ3QMK1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sgo2bJ3QMK1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sgo2bJ3QMK1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms