Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13d-3J3QMG8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-3J3QMG8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-3J3QMG8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-3J3QMG8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav13d-3J3QMG8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trav13d-3J3QMG8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13d-3J3QMG8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13d-3J3QMG8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13d-3J3QMG8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms