Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna9G3X8Z7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna9G3X8Z7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chrna9G3X8Z7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna9G3X8Z7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna9G3X8Z7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Gm26524-201ENSMUST00000192339 390 ntBASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Gm38285-201ENSMUST00000192928 922 ntBASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna9G3X8Z7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna9G3X8Z7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna9G3X8Z7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna9G3X8Z7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna9G3X8Z7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna9G3X8Z7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna9G3X8Z7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna9G3X8Z7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna9G3X8Z7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms