Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-2D3Z4R4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nkx6-2D3Z4R4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-2D3Z4R4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-2D3Z4R4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-2D3Z4R4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx6-2D3Z4R4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx6-2D3Z4R4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx6-2D3Z4R4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx6-2D3Z4R4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx6-2D3Z4R4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-2D3Z4R4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-2D3Z4R4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx6-2D3Z4R4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx6-2D3Z4R4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms