Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lonrf1D3YY23 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lonrf1D3YY23 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Gm18671-201ENSMUST00000214826 683 ntBASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lonrf1D3YY23 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lonrf1D3YY23 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lonrf1D3YY23 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.52■□□□□ 0.56
Lonrf1D3YY23 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lonrf1D3YY23 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lonrf1D3YY23 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lonrf1D3YY23 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lonrf1D3YY23 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Gm42642-201ENSMUST00000200683 355 ntBASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lonrf1D3YY23 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.5■□□□□ 0.55
Lonrf1D3YY23 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lonrf1D3YY23 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms