Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ptchd4B9EKX1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd4B9EKX1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.39■□□□□ 0.69
Ptchd4B9EKX1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd4B9EKX1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd4B9EKX1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptchd4B9EKX1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.39■□□□□ 0.69
Ptchd4B9EKX1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptchd4B9EKX1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptchd4B9EKX1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptchd4B9EKX1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptchd4B9EKX1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptchd4B9EKX1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptchd4B9EKX1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptchd4B9EKX1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptchd4B9EKX1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptchd4B9EKX1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptchd4B9EKX1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptchd4B9EKX1 Gm7889-201ENSMUST00000185591 958 ntBASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptchd4B9EKX1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptchd4B9EKX1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms