Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ttc38A3KMP2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ttc38A3KMP2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc38A3KMP2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc38A3KMP2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc38A3KMP2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ttc38A3KMP2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Gm10602-201ENSMUST00000098239 609 ntBASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ttc38A3KMP2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ttc38A3KMP2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Gm38285-201ENSMUST00000192928 922 ntBASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ttc38A3KMP2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ttc38A3KMP2 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ttc38A3KMP2 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms