Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.93■□□□□ 0.62
Scn1aA2APX8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.93■□□□□ 0.62
Scn1aA2APX8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1aA2APX8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scn1aA2APX8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1aA2APX8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.9■□□□□ 0.62
Scn1aA2APX8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1aA2APX8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.89■□□□□ 0.61
Scn1aA2APX8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Mir6982-201ENSMUST00000184354 68 ntBASIC18.89■□□□□ 0.61
Scn1aA2APX8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1aA2APX8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.89■□□□□ 0.61
Scn1aA2APX8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1aA2APX8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.88■□□□□ 0.61
Scn1aA2APX8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.88■□□□□ 0.61
Scn1aA2APX8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1aA2APX8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.87■□□□□ 0.61
Scn1aA2APX8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms