Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Gm7862-201ENSMUST00000121461 292 ntBASIC9.56□□□□□ -0.88
Ubr4A2AN08 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Gm12895-201ENSMUST00000122214 226 ntBASIC9.56□□□□□ -0.88
Ubr4A2AN08 Gm24513-201ENSMUST00000174964 138 ntBASIC9.56□□□□□ -0.88
Ubr4A2AN08 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC9.56□□□□□ -0.88
Ubr4A2AN08 Zfp783-201ENSMUST00000095946 670 ntBASIC9.56□□□□□ -0.88
Ubr4A2AN08 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 AC160393.1-201ENSMUST00000218378 1279 ntBASIC9.55□□□□□ -0.88
Ubr4A2AN08 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Gm14494-201ENSMUST00000118786 435 ntBASIC9.55□□□□□ -0.88
Ubr4A2AN08 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ubr4A2AN08 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Gm15467-201ENSMUST00000120582 445 ntBASIC9.54□□□□□ -0.88
Ubr4A2AN08 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ubr4A2AN08 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms