Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm28729A0A1B0GSW2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm10517-202ENSMUST00000192970 758 ntBASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm28729A0A1B0GSW2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm28729A0A1B0GSW2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.6■□□□□ 0.41
Gm28729A0A1B0GSW2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm28729A0A1B0GSW2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28729A0A1B0GSW2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28729A0A1B0GSW2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm28729A0A1B0GSW2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Gm28729A0A1B0GSW2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms