Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42642-201ENSMUST00000200683 355 ntBASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18671-201ENSMUST00000214826 683 ntBASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms