Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm7860-201ENSMUST00000121190 879 ntBASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm13168-201ENSMUST00000121771 632 ntBASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.59□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13n-4A0A0G2JG01 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-4A0A0G2JG01 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav13n-4A0A0G2JG01 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms