Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Nsd1-203ENSMUST00000224156 1149 ntBASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv8-27A0A0G2JF28 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv8-27A0A0G2JF28 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm45444-201ENSMUST00000211394 898 ntBASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv8-27A0A0G2JF28 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms