Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm27801-201ENSMUST00000184174 223 ntBASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6n-6A0A075B6B2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.42□□□□□ -0.26
Trav6n-6A0A075B6B2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6n-6A0A075B6B2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav6n-6A0A075B6B2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6n-6A0A075B6B2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms