Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6d-7A0A075B6B0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6d-7A0A075B6B0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-7A0A075B6B0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm38205-201ENSMUST00000192243 258 ntBASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6d-7A0A075B6B0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-7A0A075B6B0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-7A0A075B6B0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms