Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav17A0A075B655 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav17A0A075B655 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav17A0A075B655 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav17A0A075B655 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav17A0A075B655 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.33□□□□□ -0.12
Trav17A0A075B655 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Gm8493-201ENSMUST00000196881 489 ntBASIC14.33□□□□□ -0.12
Trav17A0A075B655 Gm43173-201ENSMUST00000202246 593 ntBASIC14.33□□□□□ -0.12
Trav17A0A075B655 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.33□□□□□ -0.12
Trav17A0A075B655 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav17A0A075B655 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav17A0A075B655 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Trav17A0A075B655 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav17A0A075B655 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav17A0A075B655 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.3□□□□□ -0.12
Trav17A0A075B655 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav17A0A075B655 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav17A0A075B655 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.29□□□□□ -0.12
Trav17A0A075B655 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.29□□□□□ -0.12
Trav17A0A075B655 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms