Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm8969-201ENSMUST00000199694 526 ntBASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm13241-201ENSMUST00000094493 780 ntBASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm26833-201ENSMUST00000180899 440 ntBASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav15-2-dv6-2A0A075B650 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms