Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8-1A0A075B641 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Gm43530-201ENSMUST00000195920 274 ntBASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav8-1A0A075B641 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav8-1A0A075B641 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav8-1A0A075B641 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8-1A0A075B641 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8-1A0A075B641 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms